MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6023_ses-1_T1w.
  • Date and time: 2022-11-15, 00:30.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.48251355985148536
cnr2.744651817547689
efc0.5999584342810941
fber1269.7173541742145
fwhmavg4.224106666666667
fwhmx4.1639
fwhmy4.69318
fwhmz3.81524
icvscsf0.20272508561605332
icvsgm0.41277330360176023
icvswm0.3845016107821864
inumed1.370120644569397
inurange0.5306808054447174
qi10.0
qi20.004157578538241574
rpvecsf28.30241031113219
rpvegm14.416369232328094
rpvewm18.36780160741856
sizex176
sizey256
sizez256
snrcsf3.2848149699797444
snrgm11.103652145434069
snrtotal12.556335600048039
snrwm23.2805396847303
snrdcsf29.427004036113303
snrdgm72.70165871340897
snrdtotal65.346898167316
snrdwm93.91203175242572
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk7.119885392545129
summarybgmad6.976064209070754
summarybgmean16.37363746050039
summarybgmedian15.51471957564354
summarybgn2084404.0
summarybgp056.740001127123833
summarybgp9531.0930240675807
summarybgstdv8.104971806061483
summarycsfk9.52304754697318
summarycsfmad62.690306743676366
summarycsfmean341.5926998277835
summarycsfmedian313.3464674949646
summarycsfn31601.0
summarycsfp05236.59947352856398
summarycsfp95539.3272600024939
summarycsfstdv95.39091621980822
summarygmk0.07456227123628434
summarygmmad68.62938843518255
summarygmmean776.8042539609064
summarygmmedian774.1463558748364
summarygmn22772.0
summarygmp05667.7052059993148
summarygmp95897.4025368642062
summarygmstdv69.71844468653788
summarywmk0.4533040801624262
summarywmmad40.34804704705787
summarywmmean999.1638772550399
summarywmmedian999.9999785497785
summarywmn209011.0
summarywmp05925.7963812351227
summarywmp951067.9086691513658
summarywmstdv42.95422700120114
tpmoverlapcsf0.16153711080551147
tpmoverlapgm0.42079561948776245
tpmoverlapwm0.4685414135456085
wm2max0.6385130080733993
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime16:48:41.862500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.105753, 0.983085, 0.149535, -0.0161851, 0.148657, -0.988756]
ImageOrientationTextSag>Cor(-6.1)>Tra(0.0)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0283778
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber14
ShimSetting[2628, 5459, -7448, -80, -81, -736, 150, -153]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp221.15
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum174f15776912e973ca04b1a935f12624
softwaremriqc
version0.16.1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.